ISCB-Asia/SCCG 2012, session on Computational Statistics in Modern Biology


Chunlin Ji
Kuang-Chi Institute of Advanced Technology, Shenzhen

On Bayesian nonparametric modeling for spatial point processes

Abstract

We discuss some nonparametric Bayesian mixture models for spatial point processes with applications in biological contexts. We first describes and develops models for spatial point processes in which the point outcomes are latent, where indirect observations related to the point outcomes are available, and in which the underlying spatial intensity functions are typically highly heterogenous. Spatial intensities of inhomogeneous Poisson processes are represented via flexible nonparametric Bayesian mixture models. Examples drawn from immunofluorescence histology analysis in biological studies, demonstrate the modelling approach and computational methodology. We also discuss dynamic spatial mixture modeling for inhomogeneous point processes. A time varying spatial Dirichlet process Gaussian mixture model is proposed to characterize the underling dynamic of intensity of the spatial inhomogeneous point process. We illustrate this approach via simulation examples of extended target tracking and cell fluorescent microscopic imaging tracking.

Biography

Dr. Chunlin Ji received the Ph.D. degree in statistical science from Duke University, Durham, NC, U.S. in 2009. He was a Junior Research Assistant with the Department of Electronic Engineering, Chinese University of Hong Kong, in 2004, a Research Assistant with the Department of Electronic Engineering, City University of Hong Kong, in 2006, and a Postdoctoral research fellow with the Department of Statistics, Harvard University, in 2010. He is currently the Vice-President of Shenzhen Kuang-Chi Institute of Advanced Technology. His research interests include nonparametric Bayesian modeling, Monte Carlo methods, design of computer experiments, machine learning and statistical signal processing. His collaborations and inter-disciplinary statistical research have spanned areas including metamaterial design, wireless communications, network data analysis, and others. He has published about 40 papers in various journals and conferences.